STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_447napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family protein (197 aa)    
Predicted Functional Partners:
DR93_446
annotation not available
 
  
 0.994
napH
Quinol dehydrogenase membrane component; napH_: ferredoxin-type , NapH/MauN family protein
 
 
 0.985
napA
NAPA: periplasmic nitrate reductase, large subunit
 
 
 0.975
napG
Quinol dehydrogenase periplasmic component; mauM_napG: MauM/NapG ferredoxin-type family protein
 
 
 0.963
DR93_441
napF: ferredoxin-type protein NapF
 
  
 0.940
DR93_442
annotation not available
 
  
 0.910
arcB
annotation not available
    
 
 0.889
DR93_175
napF: ferredoxin-type protein NapF
 
  
 0.746
nrfB
cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit
 
 
 0.518
dprA
dprA: DNA protecting protein DprA
       0.507
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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