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icd protein (Pasteurella multocida) - STRING interaction network
"icd" - Idp in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icdIdp; Prok_nadp_idh- isocitrate dehydrogenase, NADP-dependent (415 aa)    
Predicted Functional Partners:
sucA
2oxo_dh_E1- oxoglutarate dehydrogenase (succinyl-transferring), E1 component (931 aa)
     
 
  0.967
acnB
Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; acnB- aconitate hydratase 2 (868 aa)
   
 
  0.945
DR93_1451
annotation not available (396 aa)
     
  0.874
gdhA
annotation not available (449 aa)
     
  0.871
purB
purB- adenylosuccinate lyase (455 aa)
   
 
    0.851
gabD
annotation not available (481 aa)
 
 
  0.826
DR93_2026
Aminotransferase AlaT (404 aa)
     
 
  0.817
argH
argH- argininosuccinate lyase (457 aa)
     
 
  0.805
aspA
aspA- aspartate ammonia-lyase (472 aa)
         
  0.801
mdh
MDH_euk_gproteo- malate dehydrogenase, NAD-dependent (311 aa)
   
 
  0.789
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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