STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ilvDilvD: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family (611 aa)    
Predicted Functional Partners:
ilvC
ilvC: ketol-acid reductoisomerase
 
 0.996
ilvE
ilvE_II: branched-chain amino acid aminotransferase
  
 0.986
leuA
leuA_bact: 2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family
 
 
 0.967
DR93_479
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type
 
 0.947
DR93_2026
Aminotransferase AlaT
  
 
 0.918
DR93_1711
Acolac_lg: acetolactate synthase, large subunit, biosynthetic type
 
 0.913
ilvN
Acolac_sm: acetolactate synthase, small subunit
 
 
 0.912
ilvA
ilvA_2Cterm: threonine ammonia-lyase, biosynthetic
  
 0.911
leuC
annotation not available
 
 
 0.900
guaA
guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain
  
  
 0.808
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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