STRINGSTRING
araD protein (Pasteurella multocida) - STRING interaction network
araD: L-ribulose-5-phosphate 4-epimerase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
araDaraD- L-ribulose-5-phosphate 4-epimerase (231 aa)    
Predicted Functional Partners:
DR93_488
annotation not available (286 aa)
 
  0.998
xylB
Uncharacterized protein; xylB- xylulokinase (489 aa)
 
   
  0.954
DR93_524
annotation not available (231 aa)
       
  0.906
DR93_469
Rpe- ribulose-phosphate 3-epimerase (223 aa)
       
  0.906
DR93_489
annotation not available (214 aa)
 
   
  0.867
uxaC
annotation not available (467 aa)
   
   
  0.831
DR93_486
Cof-sub- Cof-like hydrolase family protein (271 aa)
            0.768
lyx
annotation not available (483 aa)
         
  0.755
DR93_491
annotation not available (295 aa)
              0.734
DR93_492
annotation not available (369 aa)
              0.572
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (12%) [HD]