STRINGSTRING
lsrR protein (Pasteurella multocida) - STRING interaction network
"lsrR" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
lsrRannotation not available (307 aa)    
Predicted Functional Partners:
lsrK
annotation not available (516 aa)
 
   
  0.982
lsrG
annotation not available (104 aa)
 
   
  0.949
lsrB
annotation not available (338 aa)
 
   
  0.943
DR93_522
Autoinducer 2 aldolase (290 aa)
 
   
  0.918
DR93_520
annotation not available (330 aa)
 
   
  0.911
DR93_519
annotation not available (330 aa)
 
   
  0.890
DR93_518
Autoinducer 2 ABC transporter ATP-binding protein LsrA; ccmA- heme ABC exporter, ATP-binding protein CcmA (505 aa)
 
   
  0.847
ygiW
annotation not available (123 aa)
           
  0.638
pepB
annotation not available (432 aa)
           
  0.571
qseC
annotation not available (457 aa)
           
  0.550
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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