STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoDdeoD: purine nucleoside phosphorylase (238 aa)    
Predicted Functional Partners:
nadR
annotation not available
     
 0.964
gpt
annotation not available
    
 0.945
udp
Uridine-psphlse: uridine phosphorylase; Belongs to the PNP/UDP phosphorylase family
 
 
0.936
DR93_730
annotation not available
     
 0.923
cdd
Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis
    
 0.920
apt
Apt: adenine phosphoribosyltransferase
    
 0.918
upp
Upp: uracil phosphoribosyltransferase
    
 0.916
dgt
Deoxyguanosinetriphosphate triphosphohydrolase-like protein; dGTP_triPase: dGTPase family protein
     
 0.915
hpt
HGPRTase: hypoxanthine phosphoribosyltransferase
     
 0.915
ushA
annotation not available
 
  
  0.912
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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