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rimM protein (Pasteurella multocida) - STRING interaction network
"rimM" - Ribosome maturation factor RimM in Pasteurella multocida
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
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rimMRibosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes (175 aa)    
Predicted Functional Partners:
trmD
tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs; Belongs to the RNA methyltransferase TrmD family (245 aa)
 
   
  0.998
rpsP
S16- ribosomal protein S16 (82 aa)
 
   
  0.998
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
   
   
  0.888
rplA
rplA_bact- ribosomal protein L1; Belongs to the universal ribosomal protein uL1 family (229 aa)
     
   
  0.871
rpsS
rpsS_bact- ribosomal protein S19 (91 aa)
     
      0.855
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (209 aa)
     
        0.840
rpsL
rpsL_bact- ribosomal protein S12 (124 aa)
     
   
  0.837
rpsH
annotation not available (130 aa)
     
        0.821
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (163 aa)
   
        0.802
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (125 aa)
     
   
  0.787
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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