STRINGSTRING
djlA protein (Pasteurella multocida) - STRING interaction network
"djlA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
djlAannotation not available (287 aa)    
Predicted Functional Partners:
dusC
tRNA-dihydrouridine(16) synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs; Belongs to the dus family (312 aa)
   
        0.895
DR93_56
Uncharacterized protein (205 aa)
              0.845
yjjG
annotation not available (223 aa)
              0.845
nifU
annotation not available (128 aa)
   
 
  0.716
dnaK
prok_dnaK- chaperone protein DnaK; Belongs to the heat shock protein 70 family (634 aa)
   
 
  0.618
iscS
iscS- cysteine desulfurase IscS (404 aa)
   
 
  0.601
pyrE
annotation not available (214 aa)
              0.589
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates (238 aa)
              0.571
nfuA
annotation not available (194 aa)
   
 
  0.568
DR93_121
annotation not available (421 aa)
   
        0.515
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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