STRINGSTRING
deoR protein (Pasteurella multocida) - STRING interaction network
"deoR" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
deoRannotation not available (250 aa)    
Predicted Functional Partners:
deoC
deoC- deoxyribose-phosphate aldolase (223 aa)
       
  0.961
ulaA
annotation not available (596 aa)
         
  0.681
DR93_489
annotation not available (214 aa)
           
  0.621
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (125 aa)
           
  0.580
nfuA
annotation not available (194 aa)
     
   
  0.493
sgbH
annotation not available (225 aa)
           
  0.485
DR93_1628
annotation not available (333 aa)
   
 
  0.458
ulaR
annotation not available (248 aa)
   
   
0.455
DR93_593
annotation not available (40 aa)
              0.436
fruR
annotation not available (329 aa)
   
 
      0.430
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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