secE protein (Pasteurella multocida) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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some 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

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Predicted Interactions

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Score

secE

secE_bact: preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family (136 aa)

Predicted Functional Partners:

secG

0.993

secY

0.993

rplK

0.989

nusG

0.983

ffh

0.983

rpmF

0.962

rpmG

0.961

secA

0.958

rpmH

0.956

rplJ

0.955

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ffh	nusG	DR93_784	DR93_610	Ffh: signal recognition particle protein	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	0.454
ffh	rplJ	DR93_784	DR93_615	Ffh: signal recognition particle protein	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	0.886
ffh	rplK	DR93_784	DR93_611	Ffh: signal recognition particle protein	L11_bact: ribosomal protein L11	0.896
ffh	rpmF	DR93_784	DR93_22	Ffh: signal recognition particle protein	rpmF_bact: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family	0.874
ffh	rpmG	DR93_784	DR93_818	Ffh: signal recognition particle protein	rpmG_bact: ribosomal protein L33	0.586
ffh	rpmH	DR93_784	DR93_806	Ffh: signal recognition particle protein	rpmH_bact: ribosomal protein L34	0.690
ffh	secA	DR93_784	DR93_747	Ffh: signal recognition particle protein	secA: preprotein translocase, SecA subunit	0.948
ffh	secE	DR93_784	DR93_609	Ffh: signal recognition particle protein	secE_bact: preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family	0.983
ffh	secG	DR93_784	DR93_1858	Ffh: signal recognition particle protein	secG: preprotein translocase, SecG subunit	0.980
ffh	secY	DR93_784	DR93_248	Ffh: signal recognition particle protein	Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	0.988
nusG	ffh	DR93_610	DR93_784	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	Ffh: signal recognition particle protein	0.454
nusG	rplJ	DR93_610	DR93_615	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	0.753
nusG	rplK	DR93_610	DR93_611	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	L11_bact: ribosomal protein L11	0.946
nusG	secE	DR93_610	DR93_609	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	secE_bact: preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family	0.983
nusG	secY	DR93_610	DR93_248	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently	0.801
rplJ	ffh	DR93_615	DR93_784	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	Ffh: signal recognition particle protein	0.886
rplJ	nusG	DR93_615	DR93_610	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination	0.753
rplJ	rplK	DR93_615	DR93_611	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	L11_bact: ribosomal protein L11	0.995
rplJ	rpmF	DR93_615	DR93_22	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rpmF_bact: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family	0.976
rplJ	rpmG	DR93_615	DR93_818	50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors	rpmG_bact: ribosomal protein L33	0.968

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