STRINGSTRING
hupA protein (Pasteurella multocida) - STRING interaction network
"hupA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hupAannotation not available (90 aa)    
Predicted Functional Partners:
DR93_621
Conserved hypothetical protein (196 aa)
            0.732
lon
Lon- ATP-dependent protease La (804 aa)
       
  0.703
hemE
hemE- uroporphyrinogen decarboxylase (354 aa)
         
  0.583
polA
Pola- DNA polymerase I (930 aa)
     
 
  0.572
nudC
annotation not available (264 aa)
              0.501
glmS
Glucosamine--fructose-6-phosphate aminotransferase; glmS- glutamine-fructose-6-phosphate transaminase (610 aa)
              0.500
tig
Peptidyl-prolyl cis-trans isomerase; Tig- trigger factor (432 aa)
 
 
  0.492
DR93_1359
annotation not available (469 aa)
   
   
  0.484
DR93_779
tonB_Cterm- TonB family C-terminal domain protein (256 aa)
           
  0.483
dnaA
dnaA- chromosomal replication initiator protein DnaA (451 aa)
   
 
  0.482
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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