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rluD protein (Pasteurella multocida) - STRING interaction network
"rluD" - Pseudouridine synthase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rluDPseudouridine synthase; Responsible for synthesis of pseudouridine from uracil (324 aa)    
Predicted Functional Partners:
DR93_643
annotation not available (244 aa)
 
 
  0.952
cgtA
obg_CgtA- Obg family GTPase CgtA (390 aa)
 
 
  0.697
DR93_641
Putative lipoprotein (260 aa)
   
        0.696
prmC
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; RF_mod_PrmC- protein-(glutamine-N5) methyltransferase, release factor-specific (298 aa)
 
 
  0.652
ksgA
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; ksgA- dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (288 aa)
 
 
  0.607
prfB
prfB- peptide chain release factor 2 (320 aa)
 
 
  0.596
rsmI
annotation not available (281 aa)
    
 
  0.540
prfC
prfC- peptide chain release factor 3 (526 aa)
   
 
  0.531
rsmH
annotation not available (321 aa)
 
   
  0.528
engD
annotation not available (363 aa)
    
   
  0.527
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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