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xerC protein (Pasteurella multocida) - STRING interaction network
"xerC" - recomb_XerC: tyrosine recombinase XerC in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xerCrecomb_XerC- tyrosine recombinase XerC (295 aa)    
Predicted Functional Partners:
DR93_661
Uncharacterized protein; HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (236 aa)
   
        0.907
DR93_659
Conserved hypothetical protein (232 aa)
 
        0.879
DR93_662
annotation not available (140 aa)
              0.766
DR93_1805
annotation not available (930 aa)
   
 
  0.717
xerD
recomb_XerD- tyrosine recombinase XerD; Belongs to the ’phage’ integrase family (297 aa)
   
 
0.515
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine (274 aa)
   
   
  0.453
DR93_1745
annotation not available (409 aa)
           
  0.420
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
   
   
  0.400
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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