STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nhaApH-dependent sodium/proton antiporter; nhaA: Na+/H+ antiporter NhaA (393 aa)    
Predicted Functional Partners:
DR93_2075
2a37: transporter, monovalent cation:proton antiporter-2 family protein
 
   
 0.748
nhaB
Na(+)/H(+) antiporter NhaB; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons
      
 0.687
oadA
oadA: oxaloacetate decarboxylase alpha subunit
      
 0.573
DR93_677
annotation not available
       0.534
nqrB
NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; nqrB: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; Belongs to the NqrB/RnfD family
      
 0.485
DR93_679
Uncharacterized protein
       0.484
DR93_1078
annotation not available
     
 0.468
ackA
ackA: acetate kinase
     
 0.464
DR93_1140
annotation not available
 
   
 0.462
clpP
ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins; Belongs to the peptidase S14 family
      
 0.461
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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