STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rdgBannotation not available (202 aa)    
Predicted Functional Partners:
guaB
IMP_dehydrog: inosine-5'-monophosphate dehydrogenase
 
 0.996
guaA
guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain
 
 
 0.972
rph
Ribonuclease PH; Phosphorolytic exoribonuclease that removes nucleotide residues following the -CCA terminus of tRNA and adds nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates
 
    0.926
ndk
annotation not available
  
 0.918
DR93_389
Uncharacterized protein; HAD-SF-IA-v3: HAD hydrolase, IA, variant 3 family protein
  
 
  0.905
surE
5'(3')-nucleotidase/polyphosphatase; surE: 5'/3'-nucleotidase SurE
  
 
 0.904
hpt
HGPRTase: hypoxanthine phosphoribosyltransferase
  
 
  0.903
ushA
annotation not available
    
  0.902
gpt
annotation not available
    
  0.901
yjjG
annotation not available
   
 
  0.901
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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