dacA protein (Pasteurella multocida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

dacA

annotation not available (394 aa)

Predicted Functional Partners:

mrdA

0.966

mrdB

0.948

DR93_6

0.912

dacB

0.902

mrcA

0.891

DR93_8

0.828

DR93_922

0.789

rlmH

0.710

DR93_12

0.692

lipB

0.678

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR93_12	DR93_6	DR93_12	DR93_6	Uncharacterized protein	Conserved hypothetical protein	0.426
DR93_12	DR93_8	DR93_12	DR93_8	Uncharacterized protein	annotation not available	0.688
DR93_12	DR93_922	DR93_12	DR93_922	Uncharacterized protein	annotation not available	0.400
DR93_12	dacA	DR93_12	DR93_7	Uncharacterized protein	annotation not available	0.692
DR93_12	lipB	DR93_12	DR93_5	Uncharacterized protein	Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate; Belongs to the LipB family	0.543
DR93_12	mrdA	DR93_12	DR93_10	Uncharacterized protein	pbp2_mrdA- penicillin-binding protein 2	0.832
DR93_12	mrdB	DR93_12	DR93_9	Uncharacterized protein	rodA_shape- rod shape-determining protein RodA; Belongs to the SEDS family	0.783
DR93_12	rlmH	DR93_12	DR93_11	Uncharacterized protein	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.963
DR93_6	DR93_12	DR93_6	DR93_12	Conserved hypothetical protein	Uncharacterized protein	0.426
DR93_6	DR93_8	DR93_6	DR93_8	Conserved hypothetical protein	annotation not available	0.564
DR93_6	DR93_922	DR93_6	DR93_922	Conserved hypothetical protein	annotation not available	0.791
DR93_6	dacA	DR93_6	DR93_7	Conserved hypothetical protein	annotation not available	0.912
DR93_6	lipB	DR93_6	DR93_5	Conserved hypothetical protein	Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate; Belongs to the LipB family	0.868
DR93_6	mrdA	DR93_6	DR93_10	Conserved hypothetical protein	pbp2_mrdA- penicillin-binding protein 2	0.880
DR93_6	mrdB	DR93_6	DR93_9	Conserved hypothetical protein	rodA_shape- rod shape-determining protein RodA; Belongs to the SEDS family	0.871
DR93_6	rlmH	DR93_6	DR93_11	Conserved hypothetical protein	Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family	0.476
DR93_8	DR93_12	DR93_8	DR93_12	annotation not available	Uncharacterized protein	0.688
DR93_8	DR93_6	DR93_8	DR93_6	annotation not available	Conserved hypothetical protein	0.564
DR93_8	dacA	DR93_8	DR93_7	annotation not available	annotation not available	0.828
DR93_8	lipB	DR93_8	DR93_5	annotation not available	Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate-dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate; Belongs to the LipB family	0.644

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