STRINGSTRING
ribF protein (Pasteurella multocida) - STRING interaction network
"ribF" - Bifunctional riboflavin kinase/FMN adenylyltransferase in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribFBifunctional riboflavin kinase/FMN adenylyltransferase; ribF- riboflavin biosynthesis protein RibF (311 aa)    
Predicted Functional Partners:
ileS
Isoleucyl-tRNA synthetase; ileS- isoleucine--tRNA ligase (932 aa)
 
        0.959
ribE
ribE- riboflavin synthase, alpha subunit (204 aa)
   
  0.952
hpaC
Uncharacterized protein; hpaC- 4-hydroxyphenylacetate 3-monooxygenase, reductase component (168 aa)
       
    0.907
DR93_661
Uncharacterized protein; HAD-SF-IA-v1- HAD hydrolase, IA, variant 1 family protein (236 aa)
   
 
    0.904
mviN
mviN- integral membrane protein MviN (524 aa)
 
        0.874
truB
truB- tRNA pseudouridine(55) synthase (304 aa)
 
   
  0.836
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
 
   
  0.830
cmk
Cmk- cytidylate kinase (222 aa)
        0.825
trmU
tRNA-specific 2-thiouridylase MnmA; trmU- tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (366 aa)
 
        0.789
ispH
ispH_lytB- 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (314 aa)
 
   
  0.722
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (15%) [HD]