STRINGSTRING
serB protein (Pasteurella multocida) - STRING interaction network
serB: phosphoserine phosphatase SerB in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
serBserB- phosphoserine phosphatase SerB (320 aa)    
Predicted Functional Partners:
serC
3-phosphoserine/phosphohydroxythreonine aminotransferase; serC_1- phosphoserine transaminase (360 aa)
   
 
  0.962
glyA
annotation not available (420 aa)
   
  0.949
DR93_2043
Sda_mono- L-serine ammonia-lyase (455 aa)
         
  0.918
ilvA
ilvA_2Cterm- threonine ammonia-lyase, biosynthetic (513 aa)
     
 
  0.905
trpB
trpB- tryptophan synthase, beta subunit (402 aa)
   
 
    0.902
trpA
trpA- tryptophan synthase, alpha subunit (268 aa)
     
 
    0.901
pssA
annotation not available (458 aa)
       
    0.901
radA
Sms- DNA repair protein RadA (459 aa)
 
      0.868
DR93_706
Putative nucleotide-binding protein (163 aa)
              0.845
cysE
cysE- serine O-acetyltransferase (264 aa)
     
 
  0.810
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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