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rpsU protein (Pasteurella multocida) - STRING interaction network
"rpsU" - S21p: ribosomal protein S21 in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rpsUS21p- ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family (71 aa)    
Predicted Functional Partners:
rpmH
rpmH_bact- ribosomal protein L34 (44 aa)
      
 
  0.986
rpsT
S20- ribosomal protein S20 (87 aa)
   
 
  0.978
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
      
 
  0.973
rplM
rplM_bact- ribosomal protein L13 (142 aa)
      
 
  0.970
rpmB
L28- ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family (78 aa)
   
 
  0.969
rpsP
S16- ribosomal protein S16 (82 aa)
 
 
  0.968
rpmA
L27- ribosomal protein L27 (85 aa)
      
 
  0.967
rpsO
30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome (89 aa)
      
 
  0.966
rpmG
rpmG_bact- ribosomal protein L33 (56 aa)
      
 
  0.966
rpsI
annotation not available (130 aa)
    
 
  0.960
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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