aroK protein (Pasteurella multocida) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
some 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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textmining

co-expression

protein homology

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[Homology]

Score

aroK

annotation not available (175 aa)

Predicted Functional Partners:

aroB

0.998

aroA

0.993

DR93_284

0.993

aroE

0.992

aroC

0.948

DR93_1916

0.932

aroQ

0.932

dam

0.843

tyrA

0.783

DR93_1359

0.765

Your Current Organism:

Pasteurella multocida

NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DR93_1359	DR93_1916	DR93_1359	DR93_1916	annotation not available	Uncharacterized protein; CM_P_1- chorismate mutase	0.885
DR93_1359	DR93_284	DR93_1359	DR93_284	annotation not available	Shikimate 5-dehydrogenase-like protein HI_0607	0.640
DR93_1359	aroA	DR93_1359	DR93_1679	annotation not available	aroA- 3-phosphoshikimate 1-carboxyvinyltransferase	0.707
DR93_1359	aroB	DR93_1359	DR93_743	annotation not available	aroB- 3-dehydroquinate synthase	0.739
DR93_1359	aroC	DR93_1359	DR93_1133	annotation not available	aroC- chorismate synthase	0.764
DR93_1359	aroE	DR93_1359	DR93_515	annotation not available	annotation not available	0.640
DR93_1359	aroK	DR93_1359	DR93_742	annotation not available	annotation not available	0.765
DR93_1359	aroQ	DR93_1359	DR93_871	annotation not available	aroQ- 3-dehydroquinate dehydratase, type II	0.731
DR93_1359	tyrA	DR93_1359	DR93_1494	annotation not available	annotation not available	0.892
DR93_1916	DR93_1359	DR93_1916	DR93_1359	Uncharacterized protein; CM_P_1- chorismate mutase	annotation not available	0.885
DR93_1916	DR93_284	DR93_1916	DR93_284	Uncharacterized protein; CM_P_1- chorismate mutase	Shikimate 5-dehydrogenase-like protein HI_0607	0.662
DR93_1916	aroA	DR93_1916	DR93_1679	Uncharacterized protein; CM_P_1- chorismate mutase	aroA- 3-phosphoshikimate 1-carboxyvinyltransferase	0.812
DR93_1916	aroB	DR93_1916	DR93_743	Uncharacterized protein; CM_P_1- chorismate mutase	aroB- 3-dehydroquinate synthase	0.761
DR93_1916	aroC	DR93_1916	DR93_1133	Uncharacterized protein; CM_P_1- chorismate mutase	aroC- chorismate synthase	0.980
DR93_1916	aroE	DR93_1916	DR93_515	Uncharacterized protein; CM_P_1- chorismate mutase	annotation not available	0.706
DR93_1916	aroK	DR93_1916	DR93_742	Uncharacterized protein; CM_P_1- chorismate mutase	annotation not available	0.932
DR93_1916	aroQ	DR93_1916	DR93_871	Uncharacterized protein; CM_P_1- chorismate mutase	aroQ- 3-dehydroquinate dehydratase, type II	0.716
DR93_1916	tyrA	DR93_1916	DR93_1494	Uncharacterized protein; CM_P_1- chorismate mutase	annotation not available	0.994
DR93_284	DR93_1359	DR93_284	DR93_1359	Shikimate 5-dehydrogenase-like protein HI_0607	annotation not available	0.640
DR93_284	DR93_1916	DR93_284	DR93_1916	Shikimate 5-dehydrogenase-like protein HI_0607	Uncharacterized protein; CM_P_1- chorismate mutase	0.662

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