STRINGSTRING
holA protein (Pasteurella multocida) - STRING interaction network
holA: DNA polymerase III, delta subunit in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
holAholA- DNA polymerase III, delta subunit (359 aa)    
Predicted Functional Partners:
holB
holB- DNA polymerase III, delta’ subunit (327 aa)
 
  0.994
dnaN
Dnan- DNA polymerase III, beta subunit (366 aa)
 
  0.992
DR93_1020
DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3’ to 5’ exonuclease activity. The exact function of the psi subunit is unknown (136 aa)
   
  0.986
DR93_751
LPS-assembly lipoprotein LptE; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane (167 aa)
   
  0.976
dnaE
annotation not available (1159 aa)
     
  0.945
polA
Pola- DNA polymerase I (930 aa)
     
 
  0.920
pyk
Pyruv_kin- pyruvate kinase; Belongs to the pyruvate kinase family (479 aa)
 
 
    0.920
leuS
Leucyl-tRNA synthetase; leuS_bact- leucine--tRNA ligase (860 aa)
 
        0.915
holC
annotation not available (142 aa)
   
  0.911
ndk
annotation not available (139 aa)
     
 
    0.902
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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