STRINGSTRING
expD protein (Pasteurella multocida) - STRING interaction network
"expD" - exbD_2: TonB system transport protein ExbD in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
expDexbD_2- TonB system transport protein ExbD (129 aa)    
Predicted Functional Partners:
exbB
exbB2- tonB-system energizer ExbB (152 aa)
 
 
  0.993
DR93_779
tonB_Cterm- TonB family C-terminal domain protein (256 aa)
 
 
  0.976
tolQ
tolQ- protein TolQ (225 aa)
 
 
  0.634
DR93_778
annotation not available (156 aa)
              0.502
ribD
eubact_ribD- riboflavin biosynthesis protein RibD (376 aa)
         
  0.458
DR93_782
Uncharacterized protein (419 aa)
              0.449
DR93_1214
annotation not available (229 aa)
 
 
  0.419
DR93_2121
annotation not available (626 aa)
   
        0.411
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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