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ffh protein (Pasteurella multocida) - STRING interaction network
"ffh" - Ffh: signal recognition particle protein in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ffhFfh- signal recognition particle protein (458 aa)    
Predicted Functional Partners:
ftsY
Uncharacterized protein; ftsY- signal recognition particle-docking protein FtsY (459 aa)
 
0.991
secY
Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (441 aa)
   
  0.988
secE
secE_bact- preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family (136 aa)
     
  0.983
secG
secG- preprotein translocase, SecG subunit (115 aa)
     
  0.980
rplB
rplB_bact- ribosomal protein L2 (273 aa)
   
 
  0.950
secA
secA- preprotein translocase, SecA subunit (895 aa)
   
  0.948
rplQ
L17- ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family (129 aa)
   
 
  0.941
yidC
yidC_nterm- membrane protein insertase, YidC/Oxa1 family, N-terminal domain (541 aa)
     
  0.941
rplW
annotation not available (100 aa)
   
 
  0.933
rplE
annotation not available (179 aa)
 
 
  0.932
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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