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rpsF protein (Pasteurella multocida) - STRING interaction network
"rpsF" - 30S ribosomal protein S6 in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
rpsF30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (125 aa)    
Predicted Functional Partners:
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
 
 
  0.999
priB
annotation not available (108 aa)
   
   
  0.998
rplI
L9- ribosomal protein L9 (149 aa)
 
 
  0.998
rpsJ
rpsJ_bact- ribosomal protein S10 (103 aa)
   
 
  0.993
rpsB
rpsB_bact- ribosomal protein S2 (240 aa)
     
 
  0.993
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
     
 
  0.992
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
 
  0.992
rplD
rplD_bact- 50S ribosomal protein L4 (200 aa)
   
 
  0.992
rpsQ
S17_bact- 30S ribosomal protein S17 (85 aa)
     
 
  0.991
rplB
rplB_bact- ribosomal protein L2 (273 aa)
     
 
  0.991
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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