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rplI protein (Pasteurella multocida) - STRING interaction network
"rplI" - L9: ribosomal protein L9 in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rplIL9- ribosomal protein L9 (149 aa)    
Predicted Functional Partners:
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (75 aa)
 
  0.999
rpsF
30S ribosomal protein S6; Binds together with S18 to 16S ribosomal RNA (125 aa)
 
 
  0.998
rplM
rplM_bact- ribosomal protein L13 (142 aa)
   
 
  0.990
rplA
rplA_bact- ribosomal protein L1; Belongs to the universal ribosomal protein uL1 family (229 aa)
 
 
  0.989
rplU
50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20 (103 aa)
   
 
  0.988
rplQ
L17- ribosomal protein L17; Belongs to the bacterial ribosomal protein bL17 family (129 aa)
 
 
  0.988
rplL
L12- ribosomal protein L7/L12 (122 aa)
 
 
  0.987
rpsQ
S17_bact- 30S ribosomal protein S17 (85 aa)
   
 
  0.987
rpsI
annotation not available (130 aa)
     
 
  0.985
rplS
50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site (116 aa)
   
 
  0.985
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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