STRINGSTRING
ygiW protein (Pasteurella multocida) - STRING interaction network
"ygiW" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ygiWannotation not available (123 aa)    
Predicted Functional Partners:
qseC
annotation not available (457 aa)
 
   
  0.691
lsrR
annotation not available (307 aa)
           
  0.638
ihfA
himA- integration host factor, alpha subunit; Belongs to the bacterial histone-like protein family (98 aa)
           
  0.638
ihfB
Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control (94 aa)
           
  0.580
DR93_796
Conserved hypothetical protein (281 aa)
              0.530
smpA
annotation not available (137 aa)
     
   
  0.508
lsrK
annotation not available (516 aa)
           
  0.483
dcuC
dcuC- transporter, anaerobic C4-dicarboxylate uptake C family protein (449 aa)
   
          0.481
ychN
annotation not available (118 aa)
   
          0.445
sfsA
Putative DNA-binding transcriptional regulator; sfsA- sugar fermentation stimulation protein; Belongs to the SfsA family (240 aa)
           
  0.426
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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