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trmE protein (Pasteurella multocida) - STRING interaction network
"trmE" - mnmE_trmE_thdF: tRNA modification GTPase TrmE in Pasteurella multocida
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
trmEmnmE_trmE_thdF- tRNA modification GTPase TrmE (452 aa)    
Predicted Functional Partners:
gidA
gidA- tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA (629 aa)
 
  0.995
gidB
gidB- 16S rRNA (guanine(527)-N(7))-methyltransferase GidB (210 aa)
 
   
  0.960
yidC
yidC_nterm- membrane protein insertase, YidC/Oxa1 family, N-terminal domain (541 aa)
 
  0.939
leuS
Leucyl-tRNA synthetase; leuS_bact- leucine--tRNA ligase (860 aa)
 
 
   
  0.894
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (108 aa)
   
   
  0.890
rpmH
rpmH_bact- ribosomal protein L34 (44 aa)
   
   
  0.780
trmU
tRNA-specific 2-thiouridylase MnmA; trmU- tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (366 aa)
 
 
  0.771
pnp
Polynucleotide phosphorylase/polyadenylase; Polynuc_phos- polyribonucleotide nucleotidyltransferase (714 aa)
   
   
  0.740
prfA
prfA- peptide chain release factor 1 (360 aa)
 
   
  0.739
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit (795 aa)
         
  0.735
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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