STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_804Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane (86 aa)    
Predicted Functional Partners:
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme
  
  
 0.956
yidC
yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain
  
 
 0.947
rpmH
rpmH_bact: ribosomal protein L34
  
  
 0.813
trmE
mnmE_trmE_thdF: tRNA modification GTPase TrmE
       0.702
dnaN
Dnan: DNA polymerase III, beta subunit
  
  
 0.515
dnaA
dnaA: chromosomal replication initiator protein DnaA
  
    0.486
yccA
annotation not available
     
 0.474
DR93_1364
annotation not available
      
 0.459
recF
Recf: DNA replication and repair RecF family protein
  
    0.457
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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