STRINGSTRING
dnaN protein (Pasteurella multocida) - STRING interaction network
"dnaN" - Dnan: DNA polymerase III, beta subunit in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaNDnan- DNA polymerase III, beta subunit (366 aa)    
Predicted Functional Partners:
dnaE
annotation not available (1159 aa)
   
  0.995
polA
Pola- DNA polymerase I (930 aa)
 
  0.994
holA
holA- DNA polymerase III, delta subunit (359 aa)
 
  0.992
dnaA
dnaA- chromosomal replication initiator protein DnaA (451 aa)
 
 
  0.990
dnaQ
dnaQ_proteo- DNA polymerase III, epsilon subunit (253 aa)
 
 
  0.986
holB
holB- DNA polymerase III, delta’ subunit (327 aa)
 
  0.982
recF
Recf- DNA replication and repair RecF family protein (358 aa)
 
   
  0.979
hda
DNA replication initiation factor; dnaA_homol_Hda- DnaA regulatory inactivator Hda; Belongs to the DnaA family (225 aa)
 
 
  0.958
DR93_1247
annotation not available (358 aa)
     
 
  0.955
ndk
annotation not available (139 aa)
     
  0.926
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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