STRINGSTRING
recF protein (Pasteurella multocida) - STRING interaction network
"recF" - Recf: DNA replication and repair RecF family protein in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
recFRecf- DNA replication and repair RecF family protein (358 aa)    
Predicted Functional Partners:
dnaN
Dnan- DNA polymerase III, beta subunit (366 aa)
 
   
  0.979
dnaA
dnaA- chromosomal replication initiator protein DnaA (451 aa)
 
 
  0.966
gyrB
gyrB- DNA gyrase, B subunit (806 aa)
 
   
  0.909
recO
Reco- DNA repair protein RecO; Belongs to the RecO family (240 aa)
   
 
  0.820
uvrC
uvrC- excinuclease ABC subunit C (608 aa)
 
     
  0.779
polA
Pola- DNA polymerase I (930 aa)
 
   
  0.773
rpmH
rpmH_bact- ribosomal protein L34 (44 aa)
   
   
  0.754
uvrA
Uvra- excinuclease ABC subunit A (943 aa)
 
   
  0.743
recR
Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO (200 aa)
 
   
  0.738
recN
recN- DNA repair protein RecN (558 aa)
   
 
 
  0.733
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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