STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_820annotation not available (343 aa)    
Predicted Functional Partners:
DR93_821
annotation not available
 
     0.901
DR93_822
L31: ribosomal protein L31
  
    0.681
DR93_971
annotation not available
  
     0.645
DR93_842
annotation not available
 
    0.600
DR93_1285
annotation not available
  
     0.599
rfaE
Bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase; rfaE_dom_I: bifunctional protein RfaE, domain I
  
  
 0.568
DR93_3
Uncharacterized protein
  
     0.468
DR93_826
annotation not available
  
 
 0.455
DR93_1690
annotation not available
  
     0.423
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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