STRINGSTRING
fis protein (Pasteurella multocida) - STRING interaction network
"fis" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fisannotation not available (102 aa)    
Predicted Functional Partners:
dusB
annotation not available (332 aa)
 
   
  0.996
rnpA
Ribonuclease P protein component; RNaseP catalyzes the removal of the 5’-leader sequence from pre-tRNA to produce the mature 5’-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5’-leader sequence and broadening the substrate specificity of the ribozyme (108 aa)
   
        0.656
prmA
prmA- ribosomal protein L11 methyltransferase (293 aa)
   
      0.601
rplM
rplM_bact- ribosomal protein L13 (142 aa)
     
        0.582
typA
typA_BipA- GTP-binding protein TypA/BipA (616 aa)
     
   
  0.554
rpsT
S20- ribosomal protein S20 (87 aa)
   
        0.522
csrA
Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (62 aa)
           
  0.506
rpmH
rpmH_bact- ribosomal protein L34 (44 aa)
     
        0.497
rpoA
rpoA- DNA-directed RNA polymerase, alpha subunit (329 aa)
   
      0.492
priB
annotation not available (108 aa)
     
        0.474
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (13%) [HD]