STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_889annotation not available (551 aa)    
Predicted Functional Partners:
manA
manA: mannose-6-phosphate isomerase, class I
  
 
 0.919
manX
annotation not available
    
 0.917
DR93_1672
EIID-AGA: PTS system, mannose/fructose/sorbose , IID component family protein
    
 0.902
DR93_1673
EII-Sor: PTS system, mannose/fructose/sorbose , IIC component family protein
     
 0.900
deoC
deoC: deoxyribose-phosphate aldolase
  
 0.841
DR93_890
annotation not available
       0.607
DR93_961
annotation not available
  
  
 0.579
etk
annotation not available
  
  
 0.578
hpaA
hpaA: 4-hydroxyphenylacetate catabolism regulatory protein HpaA
  
 
 0.556
glmS
Glucosamine--fructose-6-phosphate aminotransferase; glmS: glutamine-fructose-6-phosphate transaminase
 
  
 0.530
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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