STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_916annotation not available (155 aa)    
Predicted Functional Partners:
DR93_1325
annotation not available
 
    0.786
hemL
hemL: glutamate-1-semialdehyde-2,1-aminomutase
 
    0.755
rpmI
rpmI_bact: ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family
  
    0.742
DR93_1619
annotation not available
   
    0.739
DR93_1150
annotation not available
      0.691
dapA
dapA: dihydrodipicolinate synthase; Belongs to the DapA family
  
    0.665
trxB
Uncharacterized protein; TRX_reduct: thioredoxin-disulfide reductase
 
  
 0.643
DR93_598
annotation not available
  
  
 0.617
hemE
hemE: uroporphyrinogen decarboxylase
  
  
 0.611
rpmE2
L31: ribosomal protein L31
   
    0.592
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (6%) [HD]