STRINGSTRING
tmcA protein (Pasteurella multocida) - STRING interaction network
"tmcA" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
tmcAannotation not available (651 aa)    
Predicted Functional Partners:
rpsA
rpsA- ribosomal protein S1 (549 aa)
     
 
  0.875
truD
annotation not available (335 aa)
 
   
  0.817
sun
rsmB- ribosomal RNA small subunit methyltransferase B (446 aa)
   
 
  0.809
truB
truB- tRNA pseudouridine(55) synthase (304 aa)
     
 
  0.808
rrmJ
rrmJ- ribosomal RNA large subunit methyltransferase J (209 aa)
     
      0.807
DR93_924
Uncharacterized protein (242 aa)
              0.792
rpoB
rpoB- DNA-directed RNA polymerase, beta subunit (1342 aa)
     
      0.766
cysS
Cysteinyl-tRNA synthetase; cysS- cysteine--tRNA ligase (459 aa)
   
        0.763
ksgA
16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; ksgA- dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family (288 aa)
   
      0.758
rnd
Rnd- ribonuclease D (383 aa)
     
      0.749
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
Server load: low (21%) [HD]