STRINGSTRING
mfd protein (Pasteurella multocida) - STRING interaction network
"mfd" - Mfd: transcription-repair coupling factor in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mfdMfd- transcription-repair coupling factor (1145 aa)    
Predicted Functional Partners:
uvrA
Uvra- excinuclease ABC subunit A (943 aa)
 
 
  0.967
polA
Pola- DNA polymerase I (930 aa)
 
     
  0.825
recN
recN- DNA repair protein RecN (558 aa)
 
 
  0.757
rpoB
rpoB- DNA-directed RNA polymerase, beta subunit (1342 aa)
     
 
  0.728
uvrC
uvrC- excinuclease ABC subunit C (608 aa)
 
 
  0.704
ruvA
ruvA- Holliday junction DNA helicase RuvA (204 aa)
 
   
  0.702
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
   
   
  0.681
pilQ
ComE; IV_pilus_PilQ- type IV pilus secretin PilQ family protein; Belongs to the GSP D family (444 aa)
           
  0.659
alr
Alr- alanine racemase (360 aa)
 
   
  0.642
uvrD
uvrD- DNA helicase II (726 aa)
   
 
  0.603
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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