STRINGSTRING
infA protein (Pasteurella multocida) - STRING interaction network
infA: translation initiation factor IF-1 in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
infAinfA- translation initiation factor IF-1 (72 aa)    
Predicted Functional Partners:
rpsM
bact_S13- 30S ribosomal protein S13; Belongs to the universal ribosomal protein uS13 family (118 aa)
 
 
  0.959
rpsK
30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine-Dalgarno cleft in the 70S ribosome (129 aa)
 
 
  0.939
rpsG
rpsG_bact- ribosomal protein S7 (156 aa)
 
 
  0.912
rplD
rplD_bact- 50S ribosomal protein L4 (200 aa)
 
 
  0.895
rpsQ
S17_bact- 30S ribosomal protein S17 (85 aa)
 
 
  0.879
rpmD
rpmD_bact- ribosomal protein L30 (59 aa)
   
   
  0.867
rplR
L18_bact- ribosomal protein L18 (117 aa)
 
        0.854
rplE
annotation not available (179 aa)
 
   
  0.854
rpsL
rpsL_bact- ribosomal protein S12 (124 aa)
 
 
  0.839
infB
IF-2- translation initiation factor IF-2 (833 aa)
     
 
  0.838
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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