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rfbB protein (Pasteurella multocida) - STRING interaction network
"rfbB" - RffG in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rfbBRffG; dTDP_gluc_dehyt- dTDP-glucose 4,6-dehydratase (345 aa)    
Predicted Functional Partners:
DR93_961
annotation not available (373 aa)
   
 
  0.793
DR93_966
Uncharacterized protein; NDP-sugDHase- nucleotide sugar dehydrogenase family protein (424 aa)
 
   
  0.766
DR93_958
annotation not available (200 aa)
         
  0.739
infA
infA- translation initiation factor IF-1 (72 aa)
              0.580
pepB
annotation not available (432 aa)
              0.556
DR93_960
wecB- UDP-N-acetylglucosamine 2-epimerase (376 aa)
 
 
  0.554
ndk
annotation not available (139 aa)
              0.553
galU
galU- UTP-glucose-1-phosphate uridylyltransferase (295 aa)
 
     
  0.495
DR93_955
annotation not available (389 aa)
 
   
  0.477
galE
galE- UDP-glucose 4-epimerase GalE (336 aa)
 
   
0.464
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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