STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
metKS-adenosylmethionine synthetase; metK: methionine adenosyltransferase (384 aa)    
Predicted Functional Partners:
metE
met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase
  
 0.989
DR93_832
annotation not available
     
  0.900
ispF
annotation not available
    
 0.817
DR93_559
Tim: triose-phosphate isomerase
 
  
 0.776
DR93_1765
Bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor; birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase
     
 0.725
guaA
guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain
 
  
 0.722
groL
groEL: chaperonin GroL
 
 
 0.722
DR93_943
annotation not available
       0.717
thrA
Bifunctional aspartokinase I/homoserine dehydrogenase I; Asp_kinase: aspartate kinase domain protein
  
  
 0.704
guaB
IMP_dehydrog: inosine-5'-monophosphate dehydrogenase
 
  
 0.701
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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