STRINGSTRING
trxA protein (Pasteurella multocida) - STRING interaction network
"trxA" - Thioredoxin: thioredoxin in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxAThioredoxin- thioredoxin (106 aa)    
Predicted Functional Partners:
trxB
Uncharacterized protein; TRX_reduct- thioredoxin-disulfide reductase (317 aa)
 
 
  0.992
dnaK
prok_dnaK- chaperone protein DnaK; Belongs to the heat shock protein 70 family (634 aa)
 
 
  0.698
polA
Pola- DNA polymerase I (930 aa)
         
  0.621
DR93_598
annotation not available (238 aa)
     
 
  0.594
DR93_916
annotation not available (155 aa)
     
 
  0.585
metB
annotation not available (369 aa)
         
  0.557
dsbD
Thiol-disulfide interchange protein DsbD (576 aa)
     
 
  0.535
arcB
annotation not available (618 aa)
     
 
  0.520
groL
groEL- chaperonin GroL (544 aa)
 
 
  0.488
guaB
IMP_dehydrog- inosine-5’-monophosphate dehydrogenase (487 aa)
         
  0.487
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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