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DR93_982 protein (Pasteurella multocida) - STRING interaction network
"DR93_982" - RNaseEG: ribonuclease, Rne/Rng family domain protein in Pasteurella multocida
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_982RNaseEG- ribonuclease, Rne/Rng family domain protein (1006 aa)    
Predicted Functional Partners:
pnp
Polynucleotide phosphorylase/polyadenylase; Polynuc_phos- polyribonucleotide nucleotidyltransferase (714 aa)
 
 
  0.959
eno
Enolase; Eno- phosphopyruvate hydratase (433 aa)
        
 
  0.932
rpoH
rpoH_proteo- alternative sigma factor RpoH (281 aa)
    
 
  0.661
hfq
RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs (96 aa)
 
 
 
  0.626
pcnB
annotation not available (501 aa)
   
 
  0.621
rnc
RNaseIII- ribonuclease III (225 aa)
 
   
  0.583
orn
annotation not available (184 aa)
    
     
  0.562
rho
Rho- transcription termination factor Rho (420 aa)
    
     
  0.545
rpoD
rpoD_Cterm- RNA polymerase sigma factor RpoD (622 aa)
    
 
  0.541
arcB
annotation not available (618 aa)
         
  0.532
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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