STRINGSTRING
rnt protein (Pasteurella multocida) - STRING interaction network
"rnt" - RNaseT: ribonuclease T in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rntRNaseT- ribonuclease T (220 aa)    
Predicted Functional Partners:
gloA
Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione (135 aa)
         
  0.695
truD
annotation not available (335 aa)
   
        0.626
DR93_986
annotation not available (452 aa)
         
  0.623
secE
secE_bact- preprotein translocase, SecE subunit; Belongs to the SecE/SEC61-gamma family (136 aa)
   
          0.619
nfuA
annotation not available (194 aa)
   
 
      0.610
hflD
annotation not available (203 aa)
   
        0.594
polA
Pola- DNA polymerase I (930 aa)
   
   
  0.586
rnc
RNaseIII- ribonuclease III (225 aa)
     
   
  0.572
guaA
guaA_Nterm- GMP synthase (glutamine-hydrolyzing), N-terminal domain (523 aa)
   
   
  0.563
zipA
septum_zipA- cell division protein ZipA (323 aa)
   
      0.521
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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