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aspS protein (Pasteurella multocida) - STRING interaction network
"aspS" - Aspartyl-tRNA synthetase in Pasteurella multocida
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspSAspartyl-tRNA synthetase; aspS_bact- aspartate--tRNA ligase (587 aa)    
Predicted Functional Partners:
nudB
annotation not available (172 aa)
   
      0.893
infB
IF-2- translation initiation factor IF-2 (833 aa)
 
 
  0.857
pheT
pheT_bact- phenylalanine--tRNA ligase, beta subunit (795 aa)
     
 
  0.832
ileS
Isoleucyl-tRNA synthetase; ileS- isoleucine--tRNA ligase (932 aa)
   
   
  0.826
metG
Methionyl-tRNA synthetase; metG- methionine--tRNA ligase (682 aa)
 
 
  0.804
DR93_995
annotation not available (246 aa)
   
   
  0.800
leuS
Leucyl-tRNA synthetase; leuS_bact- leucine--tRNA ligase (860 aa)
 
   
  0.799
valS
Valyl-tRNA synthetase; valS- valine--tRNA ligase (954 aa)
 
   
  0.790
pnp
Polynucleotide phosphorylase/polyadenylase; Polynuc_phos- polyribonucleotide nucleotidyltransferase (714 aa)
 
   
  0.743
trmE
mnmE_trmE_thdF- tRNA modification GTPase TrmE (452 aa)
   
   
  0.735
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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