STRINGSTRING
nudB protein (Pasteurella multocida) - STRING interaction network
"nudB" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nudBannotation not available (172 aa)    
Predicted Functional Partners:
folE
folE- GTP cyclohydrolase I; Belongs to the GTP cyclohydrolase I family (218 aa)
   
 
    0.908
queD
queuosine_QueD- queuosine biosynthesis protein QueD (141 aa)
       
    0.900
DR93_995
annotation not available (246 aa)
   
   
  0.897
aspS
Aspartyl-tRNA synthetase; aspS_bact- aspartate--tRNA ligase (587 aa)
   
      0.893
DR93_993
Uncharacterized protein (261 aa)
              0.831
DR93_1727
annotation not available (191 aa)
   
 
      0.645
DR93_894
Uncharacterized protein (96 aa)
   
          0.627
ruvC
ruvC- crossover junction endodeoxyribonuclease RuvC (190 aa)
   
        0.603
DR93_996
annotation not available (136 aa)
              0.597
lptA
outer_YhbN_LptA- lipopolysaccharide transport periplasmic protein LptA (170 aa)
   
 
      0.571
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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