STRINGSTRING
DR93_995 protein (Pasteurella multocida) - STRING interaction network
"DR93_995" - annotation not available in Pasteurella multocida
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DR93_995annotation not available (246 aa)    
Predicted Functional Partners:
nudB
annotation not available (172 aa)
   
   
  0.897
DR93_993
Uncharacterized protein (261 aa)
              0.831
aspS
Aspartyl-tRNA synthetase; aspS_bact- aspartate--tRNA ligase (587 aa)
   
   
  0.800
tyrS
tyrS- tyrosine--tRNA ligase (395 aa)
 
      0.792
ruvC
ruvC- crossover junction endodeoxyribonuclease RuvC (190 aa)
   
   
  0.761
DR93_996
annotation not available (136 aa)
              0.597
ruvA
ruvA- Holliday junction DNA helicase RuvA (204 aa)
         
  0.583
ruvB
ruvB- Holliday junction DNA helicase RuvB (335 aa)
         
  0.572
prfA
prfA- peptide chain release factor 1 (360 aa)
   
      0.484
rplC
50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3’-end of the 23S rRNA, where it nucleates assembly of the 50S subunit (209 aa)
   
        0.473
Your Current Organism:
Pasteurella multocida
NCBI taxonomy Id: 747
Other names: ATCC 43137, Bacterium multocidum, CCUG 17976, CCUG 17976 B, CCUG 43504, CIP 103286, DSM 16031, LMG 2851, Micrococcus gallicidus, NCTC 10322, P. multocida, Pasteurella cholerae-gallinarum, Pasteurella gallicida, Pasteurella multocida
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