STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
W4KR14_9AGAMUncharacterized protein. (384 aa)    
Predicted Functional Partners:
W4KII3_9AGAM
Nudix hydrolase domain-containing protein.
   
 
 0.974
W4KN78_9AGAM
Uncharacterized protein.
   
 
 0.974
W4K9U7_9AGAM
Ribosomal_L5_C domain-containing protein.
   
 
 0.971
W4JRB4_9AGAM
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
   
 0.961
W4KID4_9AGAM
Ribosomal_L18e/L15P domain-containing protein.
   
 
 0.955
W4KLV2_9AGAM
Uncharacterized protein; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.939
W4K0J7_9AGAM
Uncharacterized protein.
   
 
 0.934
W4KND1_9AGAM
Uncharacterized protein.
   
 
 0.925
W4KPS5_9AGAM
MRP-S28 domain-containing protein.
   
   0.902
W4JZH2_9AGAM
Uncharacterized protein.
   
 
 0.901
Your Current Organism:
Heterobasidion irregulare
NCBI taxonomy Id: 747525
Other names: H. irregulare TC 32-1, Heterobasidion irregulare TC 32-1
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