STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK15835.1Thioredoxin reductase. (315 aa)    
Predicted Functional Partners:
ADK15834.1
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.953
ADK15441.1
Predicted oxidoreductase, Fe-S subunit.
  
 
 0.928
selD-2
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
    
 0.916
trxR
Thioredoxin reductase.
  
  
 
0.916
selD
Selenide, water dikinase; Synthesizes selenophosphate from selenide and ATP.
     
 0.906
grdA-2
Glycine/sarcosine/betaine reductase complex component A2; In the first step of glycine, betaine and sarcosine reductases, the substrate is bound to component PB via a Schiff base intermediate. Then the PB-activated substrate is nucleophilically attacked by the selenol anion of component PA to transform it to a carboxymethylated selenoether and the respective amine. By action of component PC, acetyl phosphate is formed, leaving component PA in its oxidized state. Finally component PA becomes reduced by the thioredoxin system to start a new catalytic cycle of reductive deamination.
 
   
 0.902
ADK15790.1
Thioredoxin reductase.
  
  
 
0.900
ADK15789.1
Thioredoxin; Belongs to the thioredoxin family.
 
 
 0.808
trx
Predicted thioredoxin; Belongs to the thioredoxin family.
  
 
 0.785
grdA
Glycine/sarcosine/betaine reductase complex component A2; In the first step of glycine, betaine and sarcosine reductases, the substrate is bound to component PB via a Schiff base intermediate. Then the PB-activated substrate is nucleophilically attacked by the selenol anion of component PA to transform it to a carboxymethylated selenoether and the respective amine. By action of component PC, acetyl phosphate is formed, leaving component PA in its oxidized state. Finally component PA becomes reduced by the thioredoxin system to start a new catalytic cycle of reductive deamination.
 
   
 0.699
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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