STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK16528.1Putative ABC-type sugar transporter, periplasmic component. (330 aa)    
Predicted Functional Partners:
ADK16527.1
Putative ABC-type sugar transport system, ATPase component.
 
 0.993
ADK16525.1
Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
ADK16526.1
Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 0.992
rbsA
Putative ABC-type sugar transporter, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 
 
 0.928
ADK13222.1
Putative ABC-type sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.922
ADK16908.1
Predicted membrane associated protein with a GGDEF domain.
  
 
 0.846
ADK13560.1
Predicted sensor kinase.
 
  
 
 0.610
ADK14947.1
Predicted two-component response regulator.
   
 
 0.608
ADK15860.1
Transcriptional regulatory protein.
   
 
 0.608
ADK16053.1
Putative sensor histidine kinase/response regulator hybrid.
  
 
 0.608
Your Current Organism:
Clostridium ljungdahlii
NCBI taxonomy Id: 748727
Other names: C. ljungdahlii DSM 13528, Clostridium ljungdahlii DSM 13528, Clostridium ljungdahlii PETC, Clostridium ljungdahlii str. DSM 13528, Clostridium ljungdahlii strain DSM 13528
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