Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ADK13222.1 | ADK16527.1 | CLJU_c01280 | CLJU_c34860 | Putative ABC-type sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. | Putative ABC-type sugar transport system, ATPase component. | 0.950 |
ADK13222.1 | ADK16528.1 | CLJU_c01280 | CLJU_c34870 | Putative ABC-type sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. | Putative ABC-type sugar transporter, periplasmic component. | 0.922 |
ADK13222.1 | rbsA | CLJU_c01280 | CLJU_c01270 | Putative ABC-type sugar transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. | Putative ABC-type sugar transporter, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. | 0.998 |
ADK13560.1 | ADK16053.1 | CLJU_c04780 | CLJU_c30050 | Predicted sensor kinase. | Putative sensor histidine kinase/response regulator hybrid. | 0.818 |
ADK13560.1 | ADK16528.1 | CLJU_c04780 | CLJU_c34870 | Predicted sensor kinase. | Putative ABC-type sugar transporter, periplasmic component. | 0.610 |
ADK13560.1 | ADK16908.1 | CLJU_c04780 | CLJU_c38830 | Predicted sensor kinase. | Predicted membrane associated protein with a GGDEF domain. | 0.934 |
ADK14947.1 | ADK15860.1 | CLJU_c18850 | CLJU_c28060 | Predicted two-component response regulator. | Transcriptional regulatory protein. | 0.630 |
ADK14947.1 | ADK16053.1 | CLJU_c18850 | CLJU_c30050 | Predicted two-component response regulator. | Putative sensor histidine kinase/response regulator hybrid. | 0.938 |
ADK14947.1 | ADK16528.1 | CLJU_c18850 | CLJU_c34870 | Predicted two-component response regulator. | Putative ABC-type sugar transporter, periplasmic component. | 0.608 |
ADK14947.1 | ADK16908.1 | CLJU_c18850 | CLJU_c38830 | Predicted two-component response regulator. | Predicted membrane associated protein with a GGDEF domain. | 0.910 |
ADK15860.1 | ADK14947.1 | CLJU_c28060 | CLJU_c18850 | Transcriptional regulatory protein. | Predicted two-component response regulator. | 0.630 |
ADK15860.1 | ADK16053.1 | CLJU_c28060 | CLJU_c30050 | Transcriptional regulatory protein. | Putative sensor histidine kinase/response regulator hybrid. | 0.938 |
ADK15860.1 | ADK16528.1 | CLJU_c28060 | CLJU_c34870 | Transcriptional regulatory protein. | Putative ABC-type sugar transporter, periplasmic component. | 0.608 |
ADK15860.1 | ADK16908.1 | CLJU_c28060 | CLJU_c38830 | Transcriptional regulatory protein. | Predicted membrane associated protein with a GGDEF domain. | 0.721 |
ADK16053.1 | ADK13560.1 | CLJU_c30050 | CLJU_c04780 | Putative sensor histidine kinase/response regulator hybrid. | Predicted sensor kinase. | 0.818 |
ADK16053.1 | ADK14947.1 | CLJU_c30050 | CLJU_c18850 | Putative sensor histidine kinase/response regulator hybrid. | Predicted two-component response regulator. | 0.938 |
ADK16053.1 | ADK15860.1 | CLJU_c30050 | CLJU_c28060 | Putative sensor histidine kinase/response regulator hybrid. | Transcriptional regulatory protein. | 0.938 |
ADK16053.1 | ADK16528.1 | CLJU_c30050 | CLJU_c34870 | Putative sensor histidine kinase/response regulator hybrid. | Putative ABC-type sugar transporter, periplasmic component. | 0.608 |
ADK16053.1 | ADK16908.1 | CLJU_c30050 | CLJU_c38830 | Putative sensor histidine kinase/response regulator hybrid. | Predicted membrane associated protein with a GGDEF domain. | 0.972 |
ADK16525.1 | ADK16526.1 | CLJU_c34840 | CLJU_c34850 | Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. | Predicted ABC-type sugar transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. | 0.988 |
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