STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV46949.1Amino acid ABC transporter membrane protein 1, PAAT family; COGs: COG4597 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ant:Arnit_0580 binding-protein-dependent transporter inner membrane component; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease prote [...] (384 aa)    
Predicted Functional Partners:
ADV46951.1
Amino acid ABC transporter ATP-binding protein, PAAT family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593: IPR003439: IPR017871; KEGG: ant:Arnit_0578 ABC transporter-like protein; PFAM: ABC transporter related; SMART: AAA ATPase; SPTR: ABC transporter related protein; PFAM: ABC transporter.
 
 
 0.996
ADV46950.1
Amino acid ABC transporter membrane protein 2, PAAT family; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515: IPR010065; KEGG: ant:Arnit_0579 polar amino acid ABC transporter inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, Hi [...]
 
 
0.994
ADV46948.1
Amino acid ABC transporter substrate-binding protein, PAAT family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638; KEGG: hch:HCH_05807 amino acid ABC transporter periplasmic protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; SPTR: ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: lysine-arginine-ornithine-binding periplasmic protein.
 
 
 0.991
ADV46952.1
Uncharacterized protein family UPF0126; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: sun:SUN_1327 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; PFAM: UPF0126 domain.
       0.479
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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