STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADV47295.1Plasmid stabilization system; InterPro IPR007712; KEGG: tdn:Suden_0387 hypothetical protein; PFAM: plasmid stabilization system; SPTR: Putative uncharacterized protein; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (83 aa)    
Predicted Functional Partners:
ADV47294.1
KEGG: sdl:Sdel_0470 CopG domain protein DNA-binding domain protein; SPTR: CopG domain protein DNA-binding domain protein; PFAM: Ribbon-helix-helix protein, copG family.
     
 0.827
ADV45542.1
Hypothetical protein; InterPro IPR011031; KEGG: tdn:Suden_0999 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Class III cytochrome C family.
  
     0.572
ADV46148.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.441
ADV46310.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.441
ADV46808.1
InterPro IPR009056: IPR003088; KEGG: sun:SUN_0245 cytochrome cd1 nitrite reductase; PFAM: cytochrome c class I; PRIAM: Hydroxylamine reductase; SPTR: Cytochrome cd1 nitrite reductase; PFAM: Cytochrome D1 heme domain.
  
     0.441
ADV47116.1
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.441
ADV46846.1
KEGG: sun:SUN_0297 hypothetical protein; SPTR: Putative uncharacterized protein.
  
     0.439
ADV47293.1
KEGG: sun:SUN_2150 hypothetical protein; SPTR: Putative uncharacterized protein; PFAM: Protein of unknown function (DUF540).
       0.423
ADV46710.1
Protein of unknown function DUF2062; COGs: COG3216 conserved hypothetical protein; InterPro IPR018639; KEGG: sun:SUN_1044 hypothetical protein; PFAM: Protein of unknown function DUF2062; SPTR: Putative uncharacterized protein; PFAM: Uncharacterized protein conserved in bacteria (DUF2062).
  
     0.418
rimO
SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.418
Your Current Organism:
Nitratifractor salsuginis
NCBI taxonomy Id: 749222
Other names: N. salsuginis DSM 16511, Nitratifractor salsuginis DSM 16511, Nitratifractor salsuginis E9I37-1, Nitratifractor salsuginis str. DSM 16511, Nitratifractor salsuginis strain DSM 16511
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